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AlzheimersDS/Known_CellType_Marker_Genes.csv

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celltype_code celltype_name marker_genes
Ast astrocytes GFAP,ALDH1L1,SOX9,AQP4
vRG ventricular radial glia FOS,EGR1,VIM,HES1,JUN
oRG outer radial glia PTN,VIM,PEA15,SFRP1,PTPRZ1
PgG2M cycling progenitors G2/M phase CENPF,TOP2A,HMGB2,MKI67,NUSAP1
PgS cycling progenitors S phase HMGB2,HIST1H4C,HMGN2,HIST1HID,SMC4
IP intermediate progenitors PPP1R17,SSTR2,HES6,SOX4,CCND2
ExN migrating excitatory neurons ENC1,SOX4,MEIS2,NEUROD6,SLA
ExM maturing excitatory neurons SATB2,STMN2,LIMCH1,SYT4,GAP43
ExDp1 excitatory deep layer 1 LMO3,MEG3,FBXW7,TLE4,MEF2C
ExDp2 excitatory deep layer 2 LMO3,MEG3,SYT1,GRIK2,NRCAM
InMGE interneuron MGE DLX6-AS1,MAF,SST,ERBB4,DCX,RUNX1T1
LnCGE interneuron CGE DX6-AS1,CCDC88A,DLX1,CALB2,SOX2-OT
OPC oligodendrocye precursors PTPRZ1,BCAN,SCRG1,OLIG1,PMP2