`{Rmassive}`

Installation

You can install the development version of {Rmassive} like so:

# FILL THIS IN! HOW CAN PEOPLE INSTALL YOUR DEV PACKAGE?

Run

You can launch the application by running:

Rmassive::run_app()

About

You are reading the doc about version : 0.0.0.9000

This README has been compiled on the

Sys.time()
#> [1] "2026-05-29 21:01:19 EDT"

Here are the tests results and package coverage:

devtools::check(quiet = TRUE)
#> ── R CMD check results ──────────────────────────────── Rmassive 0.0.0.9000 ────
#> Duration: 1m 26.5s
#> 
#> ❯ checking whether package ‘Rmassive’ can be installed ... [34s/35s] WARNING
#>   See below...
#> 
#> ❯ checking dependencies in R code ... WARNING
#>   '::' or ':::' imports not declared from:
#>     ‘fs’ ‘here’ ‘readr’ ‘stringr’ ‘tibble’
#>   Namespaces in Imports field not imported from:
#>     ‘listarrays’ ‘targets’
#>     All declared Imports should be used.
#> 
#> ❯ checking for missing documentation entries ... WARNING
#>   Undocumented code objects:
#>     ‘metadata’ ‘raw_spectra’
#>   Undocumented data sets:
#>     ‘metadata’ ‘raw_spectra’
#>   All user-level objects in a package should have documentation entries.
#>   See chapter ‘Writing R documentation files’ in the ‘Writing R
#>   Extensions’ manual.
#> 
#> ❯ checking contents of ‘data’ directory ... WARNING
#>   Files not of a type allowed in a ‘data’ directory:
#>     ‘dataset_name_fix_script.sh’
#>   Please use e.g. ‘inst/extdata’ for non-R data files
#> 
#> ❯ checking LazyData ... WARNING
#>     LazyData DB of 82.9 MB without LazyDataCompression set
#>     See §1.1.6 of 'Writing R Extensions'
#> 
#> ❯ checking for unstated dependencies in ‘tests’ ... WARNING
#>   '::' or ':::' import not declared from: ‘tibble’
#> 
#> ❯ checking for hidden files and directories ... NOTE
#>   Found the following hidden files and directories:
#>     .rscignore
#>     .vscode
#>   These were most likely included in error. See section ‘Package
#>   structure’ in the ‘Writing R Extensions’ manual.
#> 
#> ❯ checking DESCRIPTION meta-information ... NOTE
#>   Malformed Description field: should contain one or more complete sentences.
#> 
#> ❯ checking top-level files ... NOTE
#>   Non-standard files/directories found at top level:
#>     ‘CLAUDE.md’ ‘_targets’ ‘_targets.R’ ‘app.R’ ‘experiments’
#>     ‘proj_initializr.R’
#> 
#> ❯ checking R code for possible problems ... NOTE
#>   filename_to_environment: no visible global function definition for
#>     ‘fun_if_none’
#>   filename_to_exp_category: no visible global function definition for
#>     ‘fun_if_none’
#>   filename_to_ionization: no visible global function definition for
#>     ‘fun_if_none’
#>   filename_to_mineral: no visible global function definition for
#>     ‘fun_if_none’
#>   filename_to_temperature: no visible global function definition for
#>     ‘fun_if_none’
#>   process_all_raw_spectra : <anonymous>: no visible binding for global
#>     variable ‘Mass’
#>   process_all_raw_spectra : <anonymous>: no visible binding for global
#>     variable ‘Intensity’
#>   round_mz: no visible binding for global variable ‘mz’
#>   round_mz: no visible binding for global variable ‘i’
#>   Undefined global functions or variables:
#>     Intensity Mass fun_if_none i mz
#> 
#> 0 errors ✔ | 6 warnings ✖ | 4 notes ✖
#> Error:
#> ! R CMD check found WARNINGs

covr::package_coverage()
#> Error in `loadNamespace()`:
#> ! there is no package called 'covr'

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achara/Rmassive

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